BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014E08LP1|AL426701
(747 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig924 395 e-110
3x_Contig285 183 5e-46
>3x_Contig924
Length = 2007
Score = 395 bits (199), Expect = e-110
Identities = 217/223 (97%)
Strand = Plus / Plus
Query: 1 gatcaggaacagaatttataggtttaaattctttatattttaaattaaattcatcaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1779 gatcaggaacagaatttataggtttaaattctttatattttaaattaaattcatcaaaat 1838
Query: 61 aaaatttatcttgattaaattctaaatttttaaatgaagataatcataaattaatattat 120
|||||||||||||||||||||||||||| |||||||||||||||| || ||||||||
Sbjct: 1839 aaaatttatcttgattaaattctaaattgttaaatgaagataatcggggatgaatattat 1898
Query: 121 atttataatcataaattactatataaaatggcatagaaaacaaatgttggtataaaacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1899 atttataatcataaattactatataaaatggcatagaaaacaaatgttggtataaaacag 1958
Query: 181 ggtcaccaccacctgctacttcgaagaatgaagtattgaagtt 223
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1959 ggtcaccaccacctgctacttcgaagaatgaagtattgaagtt 2001
>3x_Contig285
Length = 777
Score = 183 bits (92), Expect = 5e-46
Identities = 92/92 (100%)
Strand = Plus / Minus
Query: 656 taagaagaaaattattaagaccgcatgcccaactactaagacattaaataattgatgatt 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 taagaagaaaattattaagaccgcatgcccaactactaagacattaaataattgatgatt 715
Query: 716 tccgcttaaaacttgattacctggtgcggcta 747
||||||||||||||||||||||||||||||||
Sbjct: 714 tccgcttaaaacttgattacctggtgcggcta 683
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8166
Number of Sequences: 1807
Number of extensions: 8166
Number of successful extensions: 81
Number of sequences better than 1.0e-20: 2
length of query: 747
length of database: 10,358,551
effective HSP length: 16
effective length of query: 731
effective length of database: 10,329,639
effective search space: 7550966109
effective search space used: 7550966109
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)